You are viewing a version of the PBR website that has limited functionality. To view the current version, please enable Javascript in your browser, close the browser, and reopen it.
For assistance, please contact the PBR Administrator
Virus Selector:
User Name:
ID Search
 
PBR Gene Detail
Display Zoom (For full gene details, mouse over gene graphic)
[VBRC|VP0031458] CHIKV-37997-E1 location: (9993..11312) VOC[890]: E1 VOC function: Envelope glycoprotein E1 [VBRC|VP0031457] CHIKV-37997-6k location: (9810..9992) VOC[889]: 6k VOC function: Structural protein 6K [VBRC|VP0031456] CHIKV-37997-E2 location: (8544..9809) VOC[888]: E2 VOC function: Envelope glycoprotein E2 [VBRC|VP0031455] CHIKV-37997-E3 location: (8349..8543) VOC[887]: E3 VOC function: Envelope glycoprotein E3 [VBRC|VP0031454] CHIKV-37997-C location: (7569..8348) VOC[885]: C VOC function: Capsid serine proteinase [VBRC|VP0031453] CHIKV-37997-sPP location: (7569..11315) VOC[886]: sPP VOC function: Structural polyprotein GenBank gene acc: AAU43881 GenBank locus name: str_polyprotein [VBRC|VP0031452] CHIKV-37997-RdRp location: (5646..7496) VOC[884]: RdRp VOC function: RNA-dependent RNA polymerase [VBRC|VP0031451] CHIKV-37997-NS3 location: (4074..5645) VOC[883]: NS3 VOC function: Phosphoesterase [VBRC|VP0031450] CHIKV-37997-NS2 location: (1683..4073) VOC[882]: NS2 VOC function: RNA helicase/protease [VBRC|VP0031449] CHIKV-37997-NS1 location: (78..1682) VOC[880]: NS1 VOC function: Methyl/guanyltransferase [VBRC|VP0031448] CHIKV-37997-nsPP location: (78..7502) VOC[881]: nsPP VOC function: Nonstructural polyprotein GenBank gene acc: AAU43880 GenBank locus name: ns_polyprotein
GENE VBRC accession: VP0031449 name: CHIKV-37997-NS1
  (4 older abbreviations)
Protein Family (VOC) VOC ID: VBRC|VC880 name: Methyl/Guanyltransferase nsP1
  abbr: NS1 function: Methyl/guanyltransferase
  alternate abbr:
Molecule type: mature_protein length: 1605 bp, 535 aa
  molecular weight: 59,945 pI: 7.48
Annotation added: 6/7/2005 source: manual
Created by UVic human annotator
Location (78..1682) in: Chikungunya virus strain 37997 (GenBank: AY726732)
VBRC Taxonomy Togaviridae>Alphavirus>Chikungunya virus
Protein Analysis   Blast Analysis   Sequence   Immune Epitopes   Curation   Notes  
Analysis Results VBRC Hits Evidence
Amino Acids Composition   IEA
Transmembrane Domains Number of domains: 0
(Select for Transmembrane Record) 		  IEA
Prosite Motifs No Hits   IEA
Coiled-coil Segments None IEA
Secretory Signal Peptides None   IEA
InterPro Hits
1.Viral methyltransferase
Show All
 IEA
Gene Ontology ID
1.GO:0003723 : RNA binding
2.GO:0008174 : mRNA methyltransferase activity
Show All
Show All
 IEA
PDB Hits
1.A mol:protein length:20 NONSTRUCTURAL PROTEIN NSP1
Show All
 IEA
Protein-Protein Interaction No Hits   IEA
Copyright © 2004-2010 PBR Consortium.   All rights reserved.    Privacy Statement   Funded by NIH/NIAID Contract No. HHSN266200400036C.
VBRC     Advanced Search     Search Tips